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- pac(8)
- printer/plotter accounting information
- AG_FixedPlotter(3)
- agar integer plot widget
- M_Plotter(3)
- Agar-Math plotting widget
- RNAplot(1)
- manual page for RNAplot 2.5.1
- barchart(n)
- Bar chart for plotting X-Y coordinate data
- bench2graph(1)
- draws Postscript graphs from Autobench output (using gnuplot)
- fadeplot(6)
- draws a waving ribbon following a sinusoidal path
- fasta(1)
- scan a protein or DNA sequence library for similar sequences tfasta - compare a protein sequence to a DNA sequence library, translating the DNA sequence library `on-the-fly'. lfasta - compare two protein or DNA sequences for local similarity and show the local sequence alignments plfasta - compare two sequences for local similarity and plot the local sequence alignments
- feature-view(1)
- Visualize GFF features using Matplotlib
- fio_generate_plots(1)
- Generate plots for Flexible I/O Tester
- gnuplot(1)
- an interactive plotting program
- gpsplot(1)
- tool to dynamically dump plot data from gpsd
- gpsprof(1)
- profile a GPS and gpsd, plotting latency information
- graph(n)
- 2D graph for plotting X-Y coordinate data
- jgraph(1)
- filter for graph plotting to postscript
- kdata_array_alloc(3)
- allocate array data for plotting
- kdata_bucket_alloc(3)
- allocate bucket data for plotting
- kdata_buffer_alloc(3)
- allocate immutable buffer data for plotting
- kdata_destroy(3)
- destroy plotting data
- kdata_hist_alloc(3)
- allocate histogram data for plotting
- kdata_mean_alloc(3)
- allocate mean data for plotting
- kdata_mean_attach(3)
- attach source for mean data plotting
- kdata_stddev_alloc(3)
- allocate standard deviation data for plotting
- kdata_stddev_attach(3)
- attach source for standard deviation data plotting
- kdata_vector_alloc(3)
- allocate vector data for plotting
- kdatacfg_defaults(3)
- set default values for plot data
- kmplot(1)
- Mathematical function plotter
- kplot(3)
- plotting library for Cairo
- kplot_alloc(3)
- allocate plotting context
- kplot_attach_data(3)
- assign plot data to plotting context
- kplot_attach_datas(3)
- assign multi-plot data to plotting context
- kplot_attach_smooth(3)
- assign smoothed plot data to plotting context
- kplot_detach(3)
- detach plots from the plotting context
- kplot_draw(3)
- plot data on Cairo context
- kplot_free(3)
- free plotting context
- kplot_get_datacfg(3)
- get data configurations for a plot
- kplot_get_plotcfg(3)
- get configuration for a plot
- kplotcfg_defaults(3)
- set default values for a plot
- labplot2(1)
- an application by KDE for interactive graphing and analysis of scientific data
- lalign(1)
- compare two protein or DNA sequences for local similarity and show the local sequence alignments plalign,flalign - compare two sequences for local similarity and plot the local sequence alignments
- mountain(6)
- random 3D plots that look vaguely mountainous
- mp3plot(1)
- creates a plot of the bitrate distribution of MP3 files
- notcurses_plot(3)
- high level widget for plotting
- opencpn(1)
- Chartplotter and GPS Navigation Software
- pbmtoplot(1)
- convert a PBM image into a Unix 'plot' file lbAC
- pfsplotresponse(1)
- Plot camera response curve using Gnuplot
- plot(1)
- translate GNU metafiles to other graphics formats SB \$1 \$2
- plot(1), plottoa(1), atoplot(1)
- graphics filters for various plotters
- plot(5)
- plotting interface
- plot-constellations(1)
- Annotates images with constellations etc
- plot-netperfmeter-results(1)
- Network Performance Meter
- plotfont(1)
- produce character maps of fonts supported by the plotting utilities SB \$1 \$2
- plotquad(1)
- Draws polygons over images
- plotxy(1)
- plots circles, crosses, etc over images
- ps_lav(1), ps_lav [-B] [-Z db_size](1)
- plot an "lav" file in postscript
- rtgplot(1)
- generate plots of RTG data
- starconvert(1)
- convert text data files to StarPlot format
- starpkg(1)
- convert a StarPlot data set to StarPlot file format
- starplot(1)
- view 3d perspective maps of stars
- stripchart(n)
- 2D strip chart for plotting x and y coordinate data
- tablix2_plot(1)
- Tablix data plotter
- tcpdump2xplot(1)
- converts tcpdump output to xplot input for analysis
- tek2plot(1)
- translate Tektronix files to other graphics formats SB \$1 \$2
- tsplot(1)
- Plot several tsung logs on the same charts, for comparison purpose
- xplot(1)
- fast tool to graph and visualize lots of data
- Bio::Graphics::Glyph::hybrid_plot(3)
- An xyplot plot drawing dual graph using data from two or more wiggle files per track
- Bio::Graphics::Glyph::pairplot(3)
- The "pairwise plot" glyph
- Bio::Graphics::Glyph::stackedplot(3)
- The stackedplot glyph
- Bio::Graphics::Glyph::ternary_plot(3)
- Draw ternary plot data
- Bio::Graphics::Glyph::vista_plot(3)
- The "vista_plot" glyph
- Bio::Graphics::Glyph::whiskerplot(3)
- The whiskerplot glyph
- Bio::Graphics::Glyph::wiggle_density(3)
- A density plot compatible with dense "wig"data
- Bio::Graphics::Glyph::wiggle_xyplot(3)
- An xyplot plot compatible with dense "wig"data
- Bio::Graphics::Glyph::xyplot(3)
- The xyplot glyph
- Bio::NEXUS::Tools::NexPlotter(3), nexplot.pl(3)
- PostScript plot of tree + data table (from NEXUS infile) =head1 SYNOPSIS nexplot.pl [options] foo.nex [tree_name] > foo.ps =head1 OPTIONS -h Brief help message -d Full documentation -v Verbose mode -V Print version information and quit -f Specify output file (default: STDOUT) INFORMATION TO DISPLAY -b Turn on bootstrap values, if any -i Turn on internal node labeling -t Tree only (ignore any characters) -I Specify character block (by "Title") to be used in matrix (e.g. "dna", "protein", "intron") -m Matrix only (ignore any trees) -c Cladogram mode: (auto if no branch lengths present in tree) normal: all branch lengths equal accelerated: same as normal except OTUs are aligned at end -U Display taxa sets in color (-U "set1 color1 [set2 color2 ...]") Color options are red, orange, green, forest, aqua, blue, purple, pink, brown, gray, black PLOT FORMATTING -r Right-justify labels (default: left-justified) -C Columns of characters per block (default = 10) -T Specify tree width (longest branch; default: 10") -S Spacing (vertically) between OTUs (default: .25") -R Ratio of font height to Spacing (default: 0.8; rec: 0.5-1) -F Font to use for labels and titles -B Draw a box indicating postscriptes bounds of the plot area -g Include gray lines after OTU labels, even if -t (tree only) option is used PAGE SETUP -s Print on multiple pages, but shrink to page height -o Print on multiple pages at actual size -W Specify output page width (default: 8.5") -H Specify output page height (default: 11") -a Change page dimensions to fit plot =head1 DESCRIPTION B<This program> will read a NEXUS file and output a PostScript display of trees (one file for each tree in the tree block), as well as any character matrix (e.g. sequences) if present in the file. =head1 FILES =over 4 =back =head1 VERSION $Id: NexPlotter.pm,v 1.2 2008/06/16 19:53:41 astoltzfus Exp $
- Chart::Clicker::Decoration::Plot(3)
- Area on which renderers draw
- Chart::Gnuplot(3)
- Plot graph using Gnuplot in Perl on the fly
- Chart::Graph(3)
- Perl extension for a front-end to gnuplot, XRT, and Xmgrace
- Chart::PNGgraph(3)
- Graph Plotting Module (deprecated)
- GD::Graph(3)
- Graph Plotting Module for Perl 5
- GD::Graph::histogram(3)
- Histogram plotting module for Perl5
- Google::Chart::Type::ScatterPlot(3)
- Google::Chart ScatterPlot Type
- Graphics::GnuplotIF(3)
- A dynamic Perl interface to gnuplot
- Imager::Plot(3)
- Perl extension for generating fancy graphic plots in color
- Imager::Plot::Axis(3)
- Axis handling of Imager::Plot
- PDL::Graphics::PGPLOT(3)
- PGPLOT enhanced interface for PDL
- PDL::Graphics::PGPLOT::Window(3)
- A OO interface to PGPLOT windows
- PDL::Graphics::PGPLOTOptions(3)
- Setting PGPLOT options
- PDL::State(3), State(3)
- A package to keep track of plotting commands
- PGPLOT(3)
- allow subroutines in the PGPLOT graphics library to be called from Perl
- Prima::Drawable::Antialias(3)
- plot antialiased shapes
- Starlink::AST::PGPLOT(3)
- AST wrapper to the PGPLOT library
- Starlink::AST::PLplot(3)
- AST wrapper to the PLplot library
- asc-plot3(1)
- produce Plot3 instructions from ASCII representation
- d.profile(1), d.profile (1)
- Plots profile of a transect
- feedgnuplot(1)
- General purpose pipe-oriented plotting tool
- g.gui.timeline(1), g.gui.timeline (1)
- Allows comparing temporal datasets by displaying their temporal extents in a plot
- g.gui.tplot(1), g.gui.tplot (1)
- Plots the values of temporal datasets
- gmx-rama(1)
- Compute Ramachandran plots
- gmx-rotmat(1)
- Plot the rotation matrix for fitting to a reference structure
- gmx-traj(1)
- Plot x, v, f, box, temperature and rotational energy from trajectories
- gmx-wheel(1)
- Plot helical wheels
- gnuplot(1)
- an interactive plotting program
- kst2(1), kst(1)
- plots scientific data
- libplot3(3)
- graphics interface subroutines
- nexplot.pl(1)
- PostScript plot of tree + data table (from NEXUS infile)
- overlay(nged)
- Plots the specified UNIX plot_file in the MGED display
- pixhist3d-plot3(1)
- output RGB color space utilization in 3D unix-plot form
- plot(1)
- graphics filter
- plot(7)
- graphics interface
- plot(nged)
- Creates a UNIX plot of the current MGED display
- plot3(5)
- 3-D and color graphic plotting interface
- plot3-asc(1)
- convert a Plot3 stream to ASCII
- plot3-fb(1)
- display 3-D UNIX plot on a framebuffer
- plot3-plot3(1)
- convert an extended to a simple UnixPlot file
- plot3-ps(1)
- convert UnixPlot to PostScript file
- plot3color(1)
- output a UnixPlot color command
- plot3getframe(1)
- extract one frame from a UNIX plot file
- plot3line2(1)
- output a 2D UnixPlot line
- plot3rot(1)
- rotate, translate, or scale a UnixPlot file
- rtcheck(1)
- Make UNIX-Plot of overlaps in an mged model, using raytracing
- rthide(1)
- ray-traces a model and writes a hidden line removed UNIX-Plot file
- rtscale(1)
- supplements rthide output by plotting a scale to indicate drawing size in arbitrary units
