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VCFCOMBINE(1)		vcfcombine (VCF	transformation)		 VCFCOMBINE(1)

NAME
       vcfcombine

SYNOPSIS
       vcfcombine [vcf file] [vcf file]	...

DESCRIPTION
       Combine	VCF files positionally,	combining samples when sites and alle-
       les are identical.  Any number of VCF files may be combined.  The  INFO
       field  and other	columns	are taken from one of the files	which are com-
       bined when records in multiple files match.  Alleles must have  identi-
       cal  ordering to	be combined into one record.  If they do not, multiple
       records will be emitted.

OPTIONS
	      options:
		  -h --help	      This text.
		  -v --version	      Print version.
		  -r --region REGION  A	region specifier of the	form chrN:x-y to bound the merge

	      Type: transformation

EXIT VALUES
       0      Success

       not 0  Failure

SEE ALSO
       vcflib(1)

OTHER
LICENSE
       Copyright 2011-2025 (C) Erik Garrison and vcflib	contributors.  MIT li-
       censed.	Copyright 2020-2025 (C)	Pjotr Prins.

AUTHORS
       Erik Garrison and vcflib	contributors.

vcfcombine (vcflib)						 VCFCOMBINE(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=vcfcombine&sektion=1&manpath=FreeBSD+Ports+15.0>

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