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VCFROC(1) vcfroc (VCF statistics) VCFROC(1) NAME vcfroc SYNOPSIS vcfroc options [] DESCRIPTION Generates a pseudo-ROC curve using sensitivity and specificity estimat- ed against a putative truth set. Thresholding is provided by succes- sive QUAL cutoffs. OPTIONS options: -t, --truth-vcf FILE use this VCF as ground truth for ROC generation -w, --window-size N compare records up to this many bp away (default 30) -c, --complex directly compare complex alleles, don't parse into primitives -r, --reference FILE FASTA reference file EXIT VALUES 0 Success not 0 Failure SEE ALSO vcflib(1) OTHER LICENSE Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT li- censed. Copyright 2020-2025 (C) Pjotr Prins. AUTHORS Erik Garrison and vcflib contributors. vcfroc (vcflib) VCFROC(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | EXIT VALUES | SEE ALSO | OTHER | LICENSE | AUTHORS
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