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extract-genes(1)	     General Commands Manual		extract-genes(1)

NAME
     extract-genes - Extract genes from a BED files containing GFF features

SYNOPSIS
     extract-genes feature-file.bed

DESCRIPTION
     extract-genes extracts genes from a BED file containing features like those
     in  a  GFF,  and  saves each gene to a separate file under the subdirectory
     Genes-feature-file.

     The resulting files are suitable for visualizing with feature-view(1).

EXAMPLE
     peak-classifier peaks.bed features.gff3 overlaps.tsv
     extract-genes features.bed
     feature-view Genes-features/2-2432432-2423444.bed

SEE ALSO
     peak-classifier(1), filter-overlaps(1), feature-view(1)

BUGS
     Please report bugs to the author and send patches in unified  diff  format.
     (man diff for more information)

AUTHOR
     J. Bacon

								extract-genes(1)

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