fastq-scum(1) General Commands Manual fastq-scum(1) SYNOPSIS fastq-scum file.fastq[.xz|.bz2|.gz] ARGUMENTS file FASTQ file, optinally compressed with xz, bzip2, or gzip DESCRIPTION fastq-scum scans a FASTQ file for known adapters and poly-A tails of length 8 or more, showing matching sequences with the adapters or tails in color. This helps the user determine optimal parameters for use with fastq-trim. RETURN VALUES 0 on success, non-zero error code otherwise EXAMPLES fastq-scum file.fastq.xz SEE ALSO fastq-trim fastq-scum(1)
SYNOPSIS | ARGUMENTS | DESCRIPTION | RETURN VALUES | EXAMPLES | SEE ALSO
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