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LOCARNAP-REVCOMP(1)    User Contributed Perl Documentation   LOCARNAP-REVCOMP(1)

NAME
     locarnap-revcomp.pl

SYNOPSIS
     locarnap-revcomp.pl [options] <fasta files>

DESCRIPTION
     locarnap-revcomp.pl  generates  a	file of reverse complement of sequences.
     The script is intended for the use in the LocARNA-P pipeline  for	refining
     RNAz hits.

OPTIONS
     --help
	 Brief help message

     --man
	 Full documentation

     Produce  reverse complement of sequences in the given fasta files and write
     a corresponding file with -rc suffix.

     The script is used to reverse-complement the sequences in Realign-Sequences
     as generated by  locarnap-revisit-RNAz-hits.  Assume  simple  fasts  format
     (only  one  line  per  sequence  after sequence header).  Reverse left_con-
     text/right_context annotation in sequence names.

perl v5.38.2			   2022-10-04		     LOCARNAP-REVCOMP(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=locarnap-revcomp.pl&sektion=1&manpath=FreeBSD+Ports+15.1.quarterly>

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