VCFANNOTATE(1) vcfannotate (VCF transformation) VCFANNOTATE(1) NAME vcfannotate SYNOPSIS vcfannotate options [] DESCRIPTION Intersect the records in the VCF file with targets provided in a BED file. Intersections are done on the reference sequences in the VCF file. If no VCF filename is specified on the command line (last argument) the VCF read from stdin. OPTIONS options: -b, --bed use annotations provided by this BED file -k, --key use this INFO field key for the annotations -d, --default use this INFO field key for records without annotations Type: transformation EXIT VALUES 0 Success not 0 Failure SEE ALSO vcflib(1) OTHER LICENSE Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT li- censed. Copyright 2020-2025 (C) Pjotr Prins. AUTHORS Erik Garrison and vcflib contributors. vcfannotate (vcflib) VCFANNOTATE(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | EXIT VALUES | SEE ALSO | OTHER | LICENSE | AUTHORS
Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=vcfannotate&sektion=1&manpath=FreeBSD+Ports+15.1.quarterly>