bl_gff3_sam_overlap(3) Library Functions Manual bl_gff3_sam_overlap(3) NAME bl_gff3_sam_overlap() - Compute SAM/GFF3 overlap LIBRARY #include <biolibc/gff3.h> -lbiolibc -lxtend SYNOPSIS int64_t bl_gff3_sam_overlap(bl_gff3_t *feature, bl_sam_t *alignment) ARGUMENTS feature Pointer to a bl_gff3_t object alignment Pointer to a bl_sam_t object DESCRIPTION Return the amount of overlap between a GFF feature and a SAM alignment. RETURN VALUES The number of bases of overlap between the feature and alignment. A zero or negative return value indicates no overlap. SEE ALSO bl_sam_gff3_overlap(3) bl_gff3_sam_overlap(3)
NAME | LIBRARY | SYNOPSIS | ARGUMENTS | DESCRIPTION | RETURN VALUES | SEE ALSO
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