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bl_vcf_cal...f_alignment(3) Library Functions Manual bl_vcf_cal...f_alignment(3)

NAME
     bl_vcf_call_downstream_of_alignment()  -  Return  true if VCF call is down-
     stream of alignment

LIBRARY
     #include <biolibc/vcf.h>
     -lbiolibc -lxtend

SYNOPSIS
     bool    bl_vcf_call_downstream_of_alignment(bl_vcf_t *vcf_call,
     bl_sam_t *alignment)

ARGUMENTS
     vcf_call	 Pointer to bl_vcf_t structure containing VCF call
     sam_alignment   Pointer to bl_sam_t structure containing alignment

DESCRIPTION
     Determine if a VCF call is downstream of a SAM alignment.	For the  purpose
     of this function, this could mean on the same chrom and higher position, or
     on a later chrom.

RETURN VALUES
     true if the call is downstream of the alignment false otherwise

SEE ALSO
     bl_vcf_call_in_alignment(3)

						     bl_vcf_cal...f_alignment(3)

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