bl_vcf_call_in_alignment(3) Library Functions Manual bl_vcf_call_in_alignment(3) NAME bl_vcf_call_in_alignment() - Return true if VCF call is within alignment LIBRARY #include <biolibc/vcf.h> -lbiolibc -lxtend SYNOPSIS bool bl_vcf_call_in_alignment(bl_vcf_t *vcf_call, bl_sam_t *sam_alignment) ARGUMENTS vcf_call Pointer to bl_vcf_t structure containing VCF call sam_alignment Pointer to bl_sam_t structure containing alignment DESCRIPTION Determine if a VCF call is within a SAM alignment, i.e. on the same chrom and between the start and end positions of the alignment. RETURN VALUES true if the call is within the alignment false otherwise SEE ALSO bl_vcf_call_downstream_of_alignment(3) bl_vcf_call_in_alignment(3)
NAME | LIBRARY | SYNOPSIS | ARGUMENTS | DESCRIPTION | RETURN VALUES | SEE ALSO
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