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blt fastx2tsv(1) General Commands Manual blt fastx2tsv(1) NAME blt fastx-stats - Report basics statistics on a FASTA/FASTQ file SYNOPSIS blt fastx-stats file.fasta blt fastx-stats file.fasta.xz prog | blt fastx-stats DESCRIPTION blt fastx-stats reports basic statistics such as number of sequences, sequence lengths, base content, etc. on a FASTA or FASTQ file. Input files may be compressed with standard compression algorithms sup- ported by xt_fopen(3), such as gzip, bzip2, and xz. EXAMPLES # Filter a FASTA file for sequences containing a pattern blt fastx-stats file.fasta.xz SEE ALSO blt-fastx-derep(1), blt-fastq-derep.sh(1), blt-fastx2tsv(1) AUTHOR J. Bacon blt fastx2tsv(1)
NAME | SYNOPSIS | DESCRIPTION | EXAMPLES | SEE ALSO | AUTHOR
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