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CSG_STAT(1)		     General Commands Manual		     CSG_STAT(1)

NAME
     csg_stat - Part of the VOTCA package

SYNOPSIS
     csg_stat [OPTIONS]

     csg_stat [--help]

DESCRIPTION
     Calculate	all  distributions  (bonded and non-bonded) specified in options
     file.  Optionally calculates update Eigen::Matrix3d for invere Monte Carlo.
     This program is called inside the	inverse  scripts.  Big	systems  can  be
     treated as well as non-bonded interactions can be evaluated.

OPTIONS
     Allowed options:

       -h [ --help ]		 display this help and exit
       --verbose		 be loud and noisy
       --verbose1		 be very loud and noisy
       -v [ --verbose2 ]	 be extremly loud and noisy
       --top arg		 atomistic topology file

     Mapping options:

       --cg arg 		 [OPTIONAL] coarse graining mapping and bond
			       definitions
				 (xml-file).  If  no file is given, program acts
     on
			       original trajectory
       --map-ignore arg 	 list of molecules to ignore if mapping is done
			       separated by ;

     Specific options:

       --options arg		 options file for coarse graining
       --do-imc 		 write out additional Inverse Monte Carlo data
       --include-intra		 do not exclude intramolecular neighbors
       --block-length arg	 write blocks of this length, the averages are
			       cleared after every write
       --ext arg (=dist.new)   Extension of the output

     Threading options:

       --nt arg (=1)		 number of threads

     Trajectory options:

       --trj arg		 atomistic trajectory file
       --begin arg (=0) 	 skip frames before this time (only works for
			       Gromacs files)
       --first-frame arg (=0)	 start with this frame
       --nframes arg		 process the given number of frames

AUTHORS
     Written and maintained by the VOTCA Development Team <devs@votca.org>

COPYRIGHT
     Copyright 2009-2024 The VOTCA Development Team (http://www.votca.org)

     Licensed under the Apache License, Version 2.0 (the "License"); you may not
     use this  file except in compliance with the License.   You  may  obtain  a
     copy of the License at

	    http://www.apache.org/licenses/LICENSE-2.0

     Unless   required	by applicable law or agreed to in writing, software dis-
     tributed under the License is distributed on an "AS IS" BASIS, WITHOUT WAR-
     RANTIES OR CONDITIONS OF ANY  KIND, either   express   or	 implied.    See
     the  License  for	the  specific  language  governing permissions and limi-
     tations under the License.

VOTCA Development Team	       csg_stat User Manual		     CSG_STAT(1)

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