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CSG_STAT(1)		    General Commands Manual		   CSG_STAT(1)

NAME
       csg_stat	- Part of the VOTCA package

SYNOPSIS
       csg_stat	[OPTIONS]

       csg_stat	[--help]

DESCRIPTION
       Calculate all distributions (bonded and non-bonded) specified in
       options file.  Optionally calculates update Eigen::Matrix3d for invere
       Monte Carlo. This program is called inside the inverse scripts. Unlike
       csg_boltzmann, big systems can be treated as well as non-bonded
       interactions can	be evaluated.

OPTIONS
       Allowed options:

	 -h [ --help ]		   display this	help and exit
	 --verbose		   be loud and noisy
	 --verbose1		   be very loud	and noisy
	 -v [ --verbose2 ]	   be extremly loud and	noisy
	 --top arg		   atomistic topology file

       Mapping options:

	 --cg arg		   [OPTIONAL] coarse graining mapping and bond
				 definitions
				   (xml-file). If no file is given, program
       acts on
				 original trajectory
	 --map-ignore arg	   list	of molecules to	ignore if mapping is
       done
				 separated by ;

       Specific	options:

	 --options arg		   options file	for coarse graining
	 --do-imc		   write out additional	Inverse	Monte Carlo
       data
	 --include-intra	   do not exclude intramolecular neighbors
	 --block-length	arg	   write blocks	of this	length,	the averages
       are
				 cleared after every write
	 --ext arg (=dist.new)	 Extension of the output

       Threading options:

	 --nt arg (=1)		   number of threads

       Trajectory options:

	 --trj arg		   atomistic trajectory	file
	 --begin arg (=0)	   skip	frames before this time	(only works
       for
				 Gromacs files)
	 --first-frame arg (=0)	   start with this frame
	 --nframes arg		   process the given number of frames

AUTHORS
       Written and maintained by the VOTCA Development Team <devs@votca.org>

COPYRIGHT
       Copyright 2009-2024 The VOTCA Development Team (http://www.votca.org)

       Licensed	under the Apache License, Version 2.0 (the "License"); you may
       not use this  file except in compliance with the	License.  You may
       obtain a	copy of	the License at

	      http://www.apache.org/licenses/LICENSE-2.0

       Unless  required	by applicable law or agreed to in writing, software
       distributed under the License is	distributed on an "AS IS" BASIS,
       WITHOUT WARRANTIES OR CONDITIONS	OF ANY	KIND, either  express  or
       implied.	  See  the  License  for  the  specific	 language  governing
       permissions and limitations under the License.

VOTCA Development Team	      csg_stat User Manual		   CSG_STAT(1)

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