ecattominc(1) ecattominc(1) NAME ecattominc - convert an ecat format file (version 6.x or 7.x) to a minc format file SYNOPSIS ecattominc [<options>] <infile> <outfile.mnc> ecattominc [-help] DESCRIPTION ecattominc will convert an ecat data file (version 6.x or 7.x) to a minc file format Unless the -small_header option is specified, ecattominc will conserve the maximum informations from the ecat header and subheader fields which will be respectively stored as attributes of the ecat-main and ecat-subhdr minc variables. By default the whole 3D or 4D volume is con- verted, however, ecattominc allows for the selection of slice and frame ranges to be copied. The voxel values of the generated minc file are decay corrected, unless the nodecay_correct flag is specified. Finally, blood data file can be inserted within the minc file with the -bloodfile option. OPTIONS Note that options can be specified in abbreviated form (as long as they are unique) and can be given anywhere on the command line. General options -byte: Write out data as bytes (default). -short: Write out data as short integers. -clobber: Overwrite existing file. -noclobber: Don't overwrite existing file (default). -verbose: List files as they are converted (default) -quiet: Do not list files as they are converted. Command specific options -decay_correct: Do decay correction on images (default). -nodecay_correct: Don't do decay correction. -slices:Range of slices to copy (counting from 0). Default value: -2147483648 -2147483648 -frames: Range of frames to copy (counting from 0). Default value: -2147483648 -2147483648 -frame: Single frame to copy (counting from 0). Default value: -2147483648 -small_header: Copy only basic header information. -all_header: Copy all header information (default). -bloodfile: Insert blood data from this file. Generic options for all commands -help: Print summary of command-line options and abort KNOWN BUGS No bug listed so far :=) SEE ALSO minctoecat(1), rawtominc(1), minctoraw(1), dicomtominc(1) AUTHOR Peter Neelin and Anthonin Reilhac (anthonin.reilhac@cermep.fr) COPYRIGHTS Copyrights 2005 by Peter Neelin ecattominc(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | General options | Command specific options | Generic options for all commands | KNOWN BUGS | SEE ALSO | AUTHOR | COPYRIGHTS
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