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extract-genes(1)	    General Commands Manual	      extract-genes(1)

NAME
       extract-genes - Extract genes from a BED	files containing GFF features

SYNOPSIS
       extract-genes feature-file.bed

DESCRIPTION
       extract-genes  extracts	genes from a BED file containing features like
       those in	a GFF, and saves each gene to a	separate file under the	subdi-
       rectory Genes-feature-file.

       The resulting files are suitable	for visualizing	with feature-view(1).

EXAMPLE
       peak-classifier peaks.bed features.gff3 overlaps.tsv
       extract-genes features.bed
       feature-view Genes-features/2-2432432-2423444.bed

SEE ALSO
       peak-classifier(1), filter-overlaps(1), feature-view(1)

BUGS
       Please report bugs to the author	and send patches in unified diff  for-
       mat.  (man diff for more	information)

AUTHOR
       J. Bacon

							      extract-genes(1)

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