FASDA(1) General Commands Manual FASDA(1) NAME fasda - Fast, simple differential analysis SYNOPSIS fasda --version fasda abundance features.gff3 alignment-file [alignment-file ...] fasda normalize [--mrn] [--output file.tsv] abundance1.tsv abundance2.tsv ... fasda fold-change [--output file.txt] [--near-exact] \ normalized-counts1.tsv normalized-counts2.tsv \ [normalized-counts3.tsv ...] fasda filter [--min-mnc N] [--max-sd N] [--min-fc N] \ [--max-p-val N] fc-file.txt fasda heatmap [--debug] features-file cond1-file cond2-file DESCRIPTION FASDA is a set of fast, simple differential analysis tools written in C for maximum speed, portability, and easy command-line use. SEE ALSO fasda-abundance(1), fasda-normalize(1), fasda-fold-change(1), fasda-fil- ter(1), fasda-heatmap(1) BUGS Please report bugs to the author and send patches in unified diff format. (man diff for more information) AUTHOR J. Bacon FASDA(1)
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