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heatmap(1) General Commands Manual heatmap(1) SYNOPSIS fasda heatmap [--debug] features-file cond1-file cond2-file ARGUMENTS --debug Show Python data structures used for heatmap features-file Reduced feature list, one per line cond[12]-file Full normalized counts lists output by FASDA DESCRIPTION Generate a heatmap from a filtered FASDA fold-change list. The features file provided by the first argument is a greatly reduced list of signifi- cant DEGs (differentially expressed genes) or transcripts, one per line: YKL103C_mRNA YIR015W_mRNA YLR054C_mRNA YER011W_mRNA The normalized counts files are the output of "fasda normalize". RETURN VALUES 0 on success, non-zero error codes otherwise EXAMPLES heatmap features.txt \ Results/11-fasda-kallisto/cond1-norm-3.tsv \ Results/11-fasda-kallisto/cond2-norm-3.tsv SEE ALSO fasda-normalize(1), fasda-fold-change(1), fasda(1) heatmap(1)
SYNOPSIS | ARGUMENTS | DESCRIPTION | RETURN VALUES | EXAMPLES | SEE ALSO
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