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LOCARNAP-REVCOMP(1)   User Contributed Perl Documentation  LOCARNAP-REVCOMP(1)

NAME
       locarnap-revcomp.pl

SYNOPSIS
       locarnap-revcomp.pl [options] <fasta files>

DESCRIPTION
       locarnap-revcomp.pl generates a file of reverse complement of
       sequences. The script is	intended for the use in	the LocARNA-P pipeline
       for refining RNAz hits.

OPTIONS
       --help
	   Brief help message

       --man
	   Full	documentation

       Produce	reverse	 complement  of	sequences in the given fasta files and
       write a corresponding file with -rc suffix.

       The script is used to  reverse-complement  the  sequences  in  Realign-
       Sequences  as  generated	 by  locarnap-revisit-RNAz-hits. Assume	simple
       fasts format (only  one	line  per  sequence  after  sequence  header).
       Reverse left_context/right_context annotation in	sequence names.

perl v5.32.1			  2022-11-19		   LOCARNAP-REVCOMP(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=locarnap-revcomp.pl&sektion=1&manpath=FreeBSD+Ports+15.0>

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