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pdb2cif(1) User Commands pdb2cif(1) NAME pdb2cif - Convert the content of a PDB file into mmCIF format SYNOPSIS pdb2cif [OPTION] input [output] DESCRIPTION This tools attempts to write out the contents of a PDB file in mmCIF for- mat. The conversion of a PDB file into mmCIF format is not trivial. The number- ing schemes differ and in some cases it is even necessary to do a sequence alignment to recover correct sequence numbers. When CCP4 is installed and sourced correctly, this tool will use the infor- mation in the CCP4 monomers library to guide the construction of a correct mmCIF file. In the absence of CCP4 a best effort is done. OPTIONS If no output file is given, the result is printed to /fIstdout. Both input and output files can be compressed. --dict=<file> Specify a dictionary file containing restraints for residues spe- cific to this file. --validate Validate the file before writing the output. --verbose,-V Be more verbose, useful to diagnose validation errors. AUTHOR Written by Maarten L. Hekkelman <maarten@hekkelman.com> REPORTING BUGS Report bugs at https://github.com/PDB-REDO/cif-tools/issues SEE ALSO cif-diff, cif-grep, cif-merge, cif-validate, cif2pdb, mmcql. version 2.0.0 2022-11-20 pdb2cif(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | AUTHOR | REPORTING BUGS | SEE ALSO
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