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PLOT-BMPROBS(1)        User Contributed Perl Documentation	 PLOT-BMPROBS(1)

plot_bmprobs
     Read a file with base match probabilites and write plot as ps file.

SYNOPSIS
     plot_bmprobs <in> <out>

     Read  a  file  <in>  with base match probabilites and write plot as ps file
     <out>.

     The in-file is supposed to contain lines of the form <i> <j> <p_ij> where i
     is a position in the first dimension (usually first sequence) and j a posi-
     tion in the second dimension (second sequence). p_ij is the probability  to
     match the positions, i.e. we expect 0<=p_ij<=1.

     The  script  requires  the statistic program R (must be in the search path)
     for generating the plot.

     Options:
	     --help	      brief help message
	     --man	      full documentation
	     --verbose	      be verbose
	     --quiet	      be quiet

DESCRIPTION
perl v5.38.2			   2022-10-04			 PLOT-BMPROBS(1)

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