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srf2fasta(1)			  Staden io_lib 		    srf2fasta(1)

NAME
     srf2fasta - Converts SRF files to fasta format

SYNOPSIS
     srf2fasta	[-C] srf_archive

DESCRIPTION
     srf2fasta	extracts  sequences from an SRF archive and writes them in fasta
     format to stdout.

OPTIONS
     -C     Masks out sequences tagged as bad quality.

EXAMPLES
     To extract only the good quality sequences from runX.srf into runX.fasta.

	 srf2fasta -C runX.srf > runX.fasta

AUTHOR
     James Bonfield, Wellcome Trust Sanger Institute

				  September 19			    srf2fasta(1)

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