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VCFANNOTATE(1) vcfannotate (VCF transformation) VCFANNOTATE(1) NAME vcfannotate SYNOPSIS vcfannotate options [] DESCRIPTION Intersect the records in the VCF file with targets provided in a BED file. Intersections are done on the reference sequences in the VCF file. If no VCF filename is specified on the command line (last argu- ment) the VCF read from stdin. OPTIONS options: -b, --bed use annotations provided by this BED file -k, --key use this INFO field key for the annotations -d, --default use this INFO field key for records without annotations Type: transformation EXIT VALUES 0 Success not 0 Failure SEE ALSO vcflib(1) OTHER LICENSE Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT li- censed. Copyright 2020-2025 (C) Pjotr Prins. AUTHORS Erik Garrison and vcflib contributors. vcfannotate (vcflib) VCFANNOTATE(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | EXIT VALUES | SEE ALSO | OTHER | LICENSE | AUTHORS
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