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VCFCOMBINE(1)		 vcfcombine (VCF transformation)	   VCFCOMBINE(1)

NAME
     vcfcombine

SYNOPSIS
     vcfcombine [vcf file] [vcf file] ...

DESCRIPTION
     Combine  VCF  files  positionally, combining samples when sites and alleles
     are identical.  Any number of VCF files may be combined.	The  INFO  field
     and  other  columns are taken from one of the files which are combined when
     records in multiple files match.  Alleles must have identical  ordering  to
     be  combined  into  one  record.	If they do not, multiple records will be
     emitted.

OPTIONS
	    options:
		-h --help	    This text.
		-v --version	    Print version.
		-r --region REGION  A region specifier of the form chrN:x-y to bound the merge

	    Type: transformation

EXIT VALUES
     0	    Success

     not 0  Failure

SEE ALSO
     vcflib(1)

OTHER
LICENSE
     Copyright 2011-2025 (C) Erik Garrison and	vcflib	contributors.	MIT  li-
     censed.  Copyright 2020-2025 (C) Pjotr Prins.

AUTHORS
     Erik Garrison and vcflib contributors.

vcfcombine (vcflib)						   VCFCOMBINE(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=vcfcombine&sektion=1&manpath=FreeBSD+Ports+15.1.quarterly>

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