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VCFFLATTEN(1)		vcfflatten (VCF	transformation)		 VCFFLATTEN(1)

NAME
       vcfflatten

SYNOPSIS
       vcfflatten [options][file] -h -help display this	help message and exit.
       -i -ignore-errors do not	flatten	locus if `AF' is not specified.

DESCRIPTION
       Removes	multi-allelic sites by picking the most	common alternate.  Re-
       quires allele frequency specification `AF' and use of `G'  and  `A'  to
       specify the fields which	vary according to the Allele or	Genotype.  VCF
       file may	be specified on	the command line or piped as stdin.

OPTIONS
	      Type: transformation

EXIT VALUES
       0      Success

       not 0  Failure

SEE ALSO
       vcflib(1)

OTHER
LICENSE
       Copyright 2011-2025 (C) Erik Garrison and vcflib	contributors.  MIT li-
       censed.	Copyright 2020-2025 (C)	Pjotr Prins.

AUTHORS
       Erik Garrison and vcflib	contributors.

vcfflatten (vcflib)						 VCFFLATTEN(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=vcfflatten&sektion=1&manpath=FreeBSD+Ports+15.0>

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