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VCFRANDOMSAMPLE(1)	vcfrandomsample (VCF statistics)      VCFRANDOMSAMPLE(1)

NAME
     vcfrandomsample

SYNOPSIS
     vcfrandomsample options []

DESCRIPTION
     Randomly  sample  sites  from  an	input VCF file, which may be provided as
     stdin.  Scale the sampling probability by the field specified in KEY.  This
     may be used to provide uniform sampling across allele frequencies, for  in-
     stance.

OPTIONS
	    options:
		-r, --rate RATE 	 base sampling probability per locus
		-s, --scale-by KEY	 scale sampling likelihood by this Float info field
		-p, --random-seed N	 use this random seed (by default read from /dev/random)
		-q, --pseudorandom-seed  use a pseudorandom seed (by default read from /dev/random)

EXIT VALUES
     0	    Success

     not 0  Failure

SEE ALSO
     vcflib(1)

OTHER
LICENSE
     Copyright	2011-2025  (C)	Erik  Garrison and vcflib contributors.  MIT li-
     censed.  Copyright 2020-2025 (C) Pjotr Prins.

AUTHORS
     Erik Garrison and vcflib contributors.

vcfrandomsample (vcflib)				      VCFRANDOMSAMPLE(1)

Want to link to this manual page? Use this URL:
<https://man.freebsd.org/cgi/man.cgi?query=vcfrandomsample&sektion=1&manpath=FreeBSD+Ports+15.1.quarterly>

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