VCFSITESUMMARIZE(1) vcfsitesummarize (VCF statistics) VCFSITESUMMARIZE(1) NAME vcfsitesummarize SYNOPSIS vcfsitesummarize DESCRIPTION Summarize by site EXAMPLES Example: **vcfsitesummarize** samples/sample.vcf CHROM POS ID REF QUAL FILTER AA AC AF AN DP NS DB H2 19 111 . A 9.6 . 0 0 19 112 . A 10 . 0 0 20 14370 rs6054257 G 29 PASS 0.5 14 3 1 1 20 17330 . T 3 q10 0.017 11 3 0 0 20 1110696 rs6040355 A 67 PASS T 10 2 1 0 20 1230237 . T 47 PASS T 13 3 0 0 20 1234567 microsat1 G 50 PASS G 6 9 3 0 0 20 1235237 . T 0 . 0 0 X 10 rsTest AC 10 PASS Type: statistics EXIT VALUES 0 Success not 0 Failure SEE ALSO vcflib(1) OTHER LICENSE Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT li- censed. Copyright 2020-2025 (C) Pjotr Prins. AUTHORS Erik Garrison and vcflib contributors. vcfsitesummarize (vcflib) VCFSITESUMMARIZE(1)
NAME | SYNOPSIS | DESCRIPTION | EXAMPLES | EXIT VALUES | SEE ALSO | OTHER | LICENSE | AUTHORS
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