VCFSTREAMSORT(1) vcfstreamsort (VCF transformation) VCFSTREAMSORT(1) NAME vcfstreamsort SYNOPSIS vcfstreamsort options [vcf file] DESCRIPTION Sorts the input (either stdin or file) using a streaming sort algorithm. Guarantees that the positional order is correct provided out-of-order vari- ants are no more than 100 positions in the VCF file apart. OPTIONS options: -h, --help this dialog -w, --window N number of sites to sort (default 10000) -a, --all load all sites and then sort in memory Type: transformation EXIT VALUES 0 Success not 0 Failure SEE ALSO vcflib(1) OTHER LICENSE Copyright 2011-2025 (C) Erik Garrison and vcflib contributors. MIT li- censed. Copyright 2020-2025 (C) Pjotr Prins. AUTHORS Erik Garrison and vcflib contributors. vcfstreamsort (vcflib) VCFSTREAMSORT(1)
NAME | SYNOPSIS | DESCRIPTION | OPTIONS | EXIT VALUES | SEE ALSO | OTHER | LICENSE | AUTHORS
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